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10 Nonprofit Tax Issues to Address Before an IRS Audit
Knowing what examiners look for can help your organization prepare.
While the percentage of nonprofit tax returns examined by the
IRS has slipped back to pre-2010 levels, it remains higher than
the rates for small corporations and individuals. The frequency is
still high enough that it strikes fear into the hearts of many who
are responsible for annual tax filings.
The good news is that IRS examination patterns can serve as a guide
for tax-exempt organizations wishing to avoid the excise taxes,
penalties, and other consequences of noncompliance. Preparation
is the best answer to an audit notice.
Following are 10 areas of concern that often come up in IRS
examinations of nonprofits.
1) Executive officer compensation
The IRS may determine that your organization’s executive
compensation is an “excess benefit transaction.” In essence, the
IRS is claiming that an individual’s total compensation package,
including all benefits, is greater than the value of the work the
person performs. Unless the claim is proven wrong, the individual is subject to a 25 percent excise tax, and the managers who
approved the compensation are subject to a 10 percent excise
tax up to $20,000.
The burden of proof is generally on the organization, which must
prove that the compensation is not excessive.
However, if you
follow three steps called the “rebuttable presumption of reasonableness,” the burden of proof shifts to the IRS.
Surprise and panic are your
worst enemies when an
IRS audit notice arrives.
Preparation can be your best
friend, but you have to know
what to expect.
. 1. Review and approval by an independent governing body or
compensation committee
2. Use of comparable compensation data for similarly
qualified persons in equivalent positions at similar
organizations
3. Documentation and recordkeeping of the deliberations
and decisions
If the IRS attempts to develop sufficient contrary evidence to
rebut the presumption of reasonableness, it usually attacks
the comparability data or the documentation.
Use competitor tax returns to support
your compensation decisions
The instructions to Form 990 Schedule J state that
organizations may use the tax returns of similar organizations
to determine comparable compensation. IRS guidance also
suggests that small organizations (those averaging less than
$1 million in gross revenue) may rely on as few as three
comparable organizations for such data. This implies, of
course, that larger organizations should have a more rigorous
method than simply downloading Form 990 from three
similar nonprofit organizations.
When considering whether to penalize for excessive
compensation, the IRS looks at the following factors:
• Is the comparability data for a similar function at a similar
organization (taxable or tax-exempt)?
• Are similar services available in the local geographic area?
• Did the organization obtain a compensation survey from a
reputable professional firm with industry knowledge and
expertise?
• Does the individual have written employment offers from
similar organizations?
Organizations under these circumstances should engage an
outside, independent professional to perform an annual
compensation survey. Nonprofit compensation data may
also be obtained from the Council on Foundations and the
Guidestar Nonprofit Compensation Report.
2) Form 1099 for independent contractors
Every vendor you pay can be scrutinized for classification and
reporting compliance.
The IRS will go through your general
ledger and ask for copies of contracts, receipts, invoices, and
Forms 1099. If the IRS determines that your organization
should have sent a 1099 to a vendor but failed to do so, it
can impose a $100 “failure to file” penalty and an additional
$100 “failure to furnish” penalty for each occurrence. Those
amounts are set to increase for information returns filed
after December 31, 2015.
The IRS can also require you to submit evidence for specified
vendors for subsequent years without opening those years
up to a full examination.
For example, if the IRS is examining
the 2012 tax return and determines that the 1099 reporting
requirements were not met in 2012, it does not have to
formally open an examination of subsequent year tax returns
in order to demand evidence that the organization met its
1099 reporting requirements in those years.
If your organization fails to issue a required 1099, the IRS will
allow you to contact the vendor for confirmation that the
vendor did, in fact, report the payment on its own tax return.
If you don’t receive confirmation, you could be subject to a
28 percent backup withholding tax. For example, if you fail
to issue a required 1099 to a vendor that was paid $20,000,
you may be liable for $5,600 in backup withholding tax, plus
penalties and interest.
Make it a habit: Obtain a W-9 from all vendors
Obtain a Form W-9, Request for Taxpayer Identification
Number and Certification, from every vendor you do
business with for every single year there is a transaction.
If the IRS determines that the organization failed to file a
required Form 1099 but did obtain a contemporaneous W-9,
the IRS will impose the failure to file/furnish penalties, but it
cannot impose the 28 percent backup withholding tax.
You should also have a robust system for issuing Form 1099.
It is easy to overlook certain vendors, to mistakenly assume
that a vendor is a corporation, or to rely on conclusions
reached in prior years. At the end of every year, do a
thorough and critical analysis of all vendors who received at
least $600 during the year.
If in doubt, it is usually better to
issue a 1099 that wasn’t necessary than to overlook one that
was required.
3) Value of gifts to employees
Your organization gave Henry a $500 gift for his 25th
anniversary and didn’t include the amount on his W-2. You
also gave your employees a $50 gift card for dinner and a
movie, but didn’t report it as taxable compensation. You are
liable for both the employer and the employee portion of
payroll taxes, as well as 25 percent federal income tax.
Include the value of gifts in employee compensation
Cash and gift certificates must always be included in taxable income.
Other gifts must also generally be included
unless they are “de minimis,” meaning that they are so
small that accounting for them is impractical or unreasonable. Examples of de minimis benefits that do not need to
be treated as taxable income include:
• Occasional use of the office copier and other supplies
• Snacks, coffee, doughnuts
• Occasional tickets to entertainment
• Flowers or fruit baskets for special circumstances
• Personal use of cell phone or laptop provided primarily for
business
Business expenses that are reimbursed under an accountable
plan are not taxable compensation.
. When in doubt, it is better to include the amount in taxable
compensation. You may choose to “gross-up” the payment to
achieve the desired after-tax consequences. For example, if
you really want Henry to get $500, pay him $650.
4) Advertising and sponsorships
Your organization has “sponsors” who receive
acknowledgement, either on your website, as part of a
conference or trade show, or as part of contractual feefor-services arrangement. While the entire payment may
be classified as “sponsorship income” on your financial
statements, the IRS will attempt to break these payments
down into their constituent parts.
Some parts of the
payment may be excludible as a contribution, as exempt
function income, or as a royalty. The examiner will attempt to
determine if any portion of the acknowledgement is taxable
as advertising.
Know the difference between advertising
and sponsorships and treat the income differently
To start, you must understand the distinction between
acknowledging a sponsor (nontaxable) and advertising
(taxable). Advertising is a payment from an outsider in which
the outsider receives something of benefit in return.
An advertisement:
• Promotes or encourages the use of the trade, business,
service, facility, or product of the payor (“Visit today and
check out our fine selection of tires”)
• Contains qualitative or comparative language (“Offering
the finest selection of tires in town” or “The largest
selection of tires in town”)
• Offers an endorsement (“Recommended for all your
automotive needs”)
• Provides price information or indications of savings or
value (“Home of the ‘Buy 3 Get 1 Free’ Special” or “Show
your ticket stub for a 10% discount”)
In most cases, advertising revenue will be treated as unrelated business income (UBI) subject to taxation, unless the
activity is not regularly carried on, or if it is directly related
to the accomplishment of the exempt purpose of your
organization (for example, a student newspaper, where
selling ads is part of the training).
A sponsorship is a payment from an outsider where the
payor receives nothing of value in return.
The sponsorship
acknowledgement may include:
• Recognition as a sponsor, including “exclusive” sponsorship
• Name, address, phone number
• Website
• Logo
• General description of product or services (“Retailer of
bathroom fixtures”)
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• Visual depictions of products or services
• Taglines (“The Ultimate Driving Machine”)
• Display or distribution of products
A sponsorship payment is usually treated as contribution
revenue. You should provide a written acknowledgement
to sponsors who give at least $250. The acknowledgment
should specify the value of any benefits that were provided
to the donor in connection with the payment, including
event tickets, goods, services, and advertising.
Benefits other
than advertising may be disregarded if the value is less
than 2 percent of the sponsorship payment. In the case of
qualified convention and trade show activities, benefits other
than advertising will not be treated as UBI even if the activity
would generate UBI if it were being conducted outside of a
convention or trade show.
5) Mailing lists
If you rent your mailing list to outside organizations, the
payment is taxable if you provide services in connection
with the rental. Some IRS agents take the position that only
transactions between two charitable 501(c)(3) organizations
can be excluded as royalties, while others have concluded
that the activity can only be passive if it is conducted by a
third-party list broker.
Use a list broker whenever possible if you rent
your mailing list to outside organizations
If you prefer to handle the mailing list rental directly, the
agreement should explicitly state that:
• Your organization is not obliged to perform any services
(such as sending emails to your members or filtering the
data in the list)
• The agreement is not a joint venture or a partnership
• Payment to your organization is for use of the list, and
you will not share in the net profit or loss (this does not
necessarily preclude the payment of a commission)
• Neither party is acting as an agent for the other
• If the contract contemplates more than just the rental of
the mailing list, the portion of the payment that relates to
the mailing list should be clearly stated.
6) Lobbying and political activity
Nonprofit organizations have varying restrictions on the
amount of lobbying and political activity they are allowed.
Engaging in impermissible activities can result in excise
taxes or revocation of your exempt status.
Membership
organizations must notify their donors of the nondeductible
portion of dues that is attributable to lobbying, or they must
pay a proxy tax.
Understand the difference between lobbying
and political activity
You should begin with an understanding of what lobbying
and political intervention mean for tax purposes:
. • Lobbying is the attempt to influence the passage or defeat
of a piece of legislation
–– Direct lobbying is contact with legislators
–– Grassroots lobbying is a call to action to motivate others
to contact legislators
• Political intervention is an attempt to influence an election
or defeat a candidate
• Lobbying and political intervention do not include:
–– Nonpartisan analysis, study, or research
–– Examination of broad social or economic problems
–– Providing technical advice in response to a written
request by a legislative body
–– Communications designed to defend your existence or
tax-exempt status
Next, determine the limits applicable to your organization:
• Private foundations may not do any lobbying or political
intervention
• Public charities (501(c)(3) organizations) may do limited
lobbying but no political intervention
• Non-charitable tax-exempt organizations may lobby and
engage in political intervention as long as it is not the
“primary purpose” of the organization
You must carefully track expenses related to your lobbying
and political activities using one of the IRS’s approved
methods of accounting:
• Gross-up method
• Ratio method
7) Reporting foreign investments
You may be generally familiar with the reporting
requirements related to programs, activities, and grants
awarded outside the United States. But it is often more
difficult to identify foreign investments that require
disclosure on Form 990 Schedule F and on other returns.
There are significant penalties for failure to properly disclose
foreign investments using the required form.
Your organization may have disclosure and additional filing
requirements when:
• It owns an interest in, or transfers property to, a foreign
corporation
• It has an interest in a foreign trust
• It owns an interest in a foreign partnership
• It is a direct or indirect shareholder in a passive foreign
investment company (PFIC)
• It had operations in a boycotting country
• It has a financial interest or signature authority over a
foreign financial account
Track the location of all foreign investments
You can generally avoid problems with foreign investments
by tracking the location of all of your organization’s
©2015 CliftonLarsonAllen LLP
investments, including those disclosed in the footnotes in all
Schedules K-1 showing pass-through income.
Identify investments that meet the definition of a financial
account — A financial account includes, but is not limited to,
a securities, brokerage, savings, demand, checking, deposit,
time deposit, or other account maintained with a financial
institution (or other person performing the services of a
financial institution). A financial account also includes a
commodity futures or options account, an insurance policy
with a cash value (such as a whole life insurance policy), an
annuity policy with a cash value, and shares in a mutual fund
or similar pooled fund that is available to the general public
with a regular net asset value determination and regular
redemptions.
You can generally avoid problems with
foreign investments by tracking the
location of all of your organization’s
investments.
Offshore hedge funds and private equity funds that are
not offered to the public will not be considered financial
accounts reportable as a financial interest in a foreign
account. Owners of offshore private investment fund
interest, and individuals with signature authority over these
interests, are not required to report these interests unless
the private investment fund itself owns financial accounts.
Determine whether the investment in a financial account
constitutes a financial interest — A U.S.
organization has a
financial interest in a foreign financial account for which it is
the direct owner of record or holder of legal title, or, among
other things, it owns more than 50 percent of a financial
account that is located outside the United States.
Identify any foreign investments held indirectly through
ownership of a pass-through interest in the United States
— Disclosure of such investments is not subject to reporting
on Schedule F Part I or for FinCen (FBAR), but may trigger the
filing of certain other returns.
Identify foreign investments that are traded on a U.S. stock
exchange — These do not need to be reported.
8) Fundraising events
Special events are often unrelated to your exempt purpose.
Absent a charitable element, they can be considered UBI,
especially if they occur frequently. Nonprofits that conduct
lavish events that result in little or no charitable revenue
may open themselves to additional scrutiny by the IRS and
criticism from the public.
“Donors” at these events must be given written
acknowledgement, particularly when they receive something
in return, such as an incentive gift.
Non-charitable exempt
. organizations should be very clear that no part of the
donation is a charitable donation. Failure to provide the
required documentation can cause the donor’s charitable
donation deduction to be denied, and can subject the
nonprofit to penalties.
Accounting for a special event requires that you track the
total gross receipts, the fair market value of anything the
donor received in return, and the total expenses of the
event. Organizations may be tempted to equate the expenses
incurred in holding the event with the value received by
the donors, but these are two independent calculations.
Likewise, do not equate the value of any goods or services
the donor received with your organization’s cost of providing
those goods and services.
Gaming activities, including lotteries, raffles, casino nights,
and poker tournaments, are generally UBI. Most states have
strict requirements for licensing and reporting.
Determine a fair market value for the activity;
any excess payment is a donation
Careful planning well in advance of the event is essential.
Identify the fair market value of the activity, such as
attending a dinner or concert, or playing a round of golf.
Only
the portion of the payment in excess of that fair market value
is a charitable donation. Keep careful records of the expenses
directly connected to the event.
Identify the fair market value of the
activity, such as attending a dinner or
playing a round of golf. Only the portion
of the payment in excess of that fair
market value is a charitable donation.
For charitable contributions of $250 or more that provide
no benefits to the donor, you must provide a written
acknowledgement that explicitly states that no goods and
services were provided:
• “No goods or services were provided in return for the
contribution.”
For payments of $75 or more that are partially a contribution
and partially a payment for goods and services, you must
provide a written acknowledgement that contains a
description and good faith estimate of the value of goods
and services provided.
• “Thank you for your payment of $100.
You received goods
and services with a fair market value of $60.”
If your organization is exempt under 501(c)(3), you should
also state that the deductible portion of the contribution is
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limited to excess payment over the fair market value of the
goods and services received.
With the exception of bingo and non-wagering sweepstakes,
organizations should exercise extreme caution if conducting
any gaming activity. Be sure to obtain the necessary licenses
from local authorities, and comply with all reporting
requirements, including Form 990 Schedule G and Form
990-T.
9) Governance policies and fraud
Form 990 Part VI contains numerous “trigger” questions
regarding governance policies. With a few exceptions, it is
unlikely that the answer to any single question will cause
an IRS audit.
However, the IRS has concluded that a pattern
of weak oversight is an indication that an examination is
warranted.
One question that has been known to trigger an IRS audit
is regarding “a significant diversion of the organization’s
assets.” An organization that discovers fraud may be tempted
to minimize or obscure it for a variety of reasons, not the
least of which is the increased chance of an IRS audit.
The entire board should have the
opportunity to review Form 990
before it is filed.
Engage your board, educate your employees,
and disclose instances of fraud
Your board of directors should be actively engaged in fraud
oversight. The board should adopt customized policies that
meet your circumstances, including policies for conflict
of interest, whistleblower protection, and document
retention and destruction. The entire board should have
the opportunity to review Form 990 before it is filed.
Explanations in Form 990 Schedule O should be brief,
concise, and accurate.
Even more important than having a fraud policy is educating
managers and employees and monitoring compliance
with the policies.
Policies should be well publicized, and
employees should provide an annual acknowledgement that
they have read and understand them. Interested persons
should complete an annual disclosure form to identify
business and family relationships.
If you become aware of fraud, you must disclose the
information on the return for the year of discovery, even if
the fraud itself occurred in a prior year. The explanation must
include a description of the fraud, the amount involved, and
the corrective action taken.
Do not provide information that
could disclose the identity of the person or persons involved.
. 10) Respond to IRS compliance notices
Your organization may receive a notice from the IRS but not fully
understand its implications, and either disregard it, or fail to bring it to
the attention of qualified personnel. Failing to respond, or responding
incompletely, can significantly increase the chance of an IRS audit.
Formally designate someone to receive and respond
to IRS notices
Form 990 Part VI allows you to provide contact information for “the
person who possesses the books and records of the organization.” Do
not simply fill in the name of your organization. When the IRS initiates
contact, it usually does so by mail, not by phone, so it is important
that you provide the name of a person who is authorized to respond
to these communications. Do not allow notices to languish in the mail
room or on the receptionist’s desk simply because there is uncertainty
about who is responsible for replying.
Promptly notify your tax advisor, even if you intend to respond to the
notice without assistance.
Do not wait until the day the response is
due, or until you receive a second (invariably more threatening) notice
to ask for guidance. Engage a professional to prepare or review the
response before it is submitted. Making a small investment to ensure a
complete and accurate response can save an enormous amount of time
and energy later.
How we can help
If you understand what is required for IRS compliance and you
act accordingly, there is no need to live in fear of an examination.
Preparation begins, not when the examination notice arrives, but in
the years prior to receiving it.
Our nonprofit consultants can provide
guidance, resources, and a tremendous amount of experience, so you
can feel confident that your operational practices can stand up to IRS
scrutiny.
Author
David Trimner, Principal, Nonprofit Tax
david.trimner@CLAconnect.com or 571-227-9676
WEALTH ADVISORY | OUTSOURCING | AUDIT, TAX, AND CONSULTING
Investment advisory services are offered through CliftonLarsonAllen
Wealth Advisors, LLC, an SEC-registered investment advisor.
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is not intended, and should not be construed, as legal,
accounting, investment or tax advice or opinion provided
by CliftonLarsonAllen LLP (CliftonLarsonAllen) to the reader.
The reader also is cautioned that this material may not be
applicable to, or suitable for, the reader’s specific circumstances
or needs, and may require consideration of nontax and
other tax factors if any action is to be contemplated. The
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